Re-sequencing of Desulfovibrio vulgaris Hildenborough biofilm from th... - SRA

SRX2971148: Re-sequencing of Desulfovibrio vulgaris Hildenborough biofilm from the University of Missouri
1 ILLUMINA (Illumina MiSeq) run: 1.5M spots, 442.8M bases, 226.6Mb downloads

Design: DvH-MO was received at the University of Missouri from the ATCC c. 2003. Genomic DNA was extracted with the Wizard® Genomic DNA Purification Kit (Promega Corp., Madison, WI) from DvH-MO biofilm grown for 168 h at 30 degrees Celcius in an anaerobic CDC biofilm reactor continuously fed with LS4D medium. Library was prepared and sequenced by the University of Missouri DNA Core (http://dnacore.missouri.edu/)

Submitted by: University of Missouri Columbia

Study: Raw Sequence Reads from Re-sequencing of Desulfovibrio vulgaris Hildenborough

PRJNA392176 • SRP110760 • All experiments • All runs

show Abstracthide Abstract

Re-sequencing of laboratory strains of Desulfovibrio vulgaris Hildenborough has identified lab-specific mutations, one of which results in a biofilm deficiency.

Sample: Biofilm of Desulfovibrio vulgaris Hildenborough from the University of Missouri grown at 30 degress Celcius in anaerobic, continuous-flow biofilm reactors (Biosurface Technologies Corp.) containing LS4D medium at pH 7.2

SAMN07284948 • SRS2326738 • All experiments • All runs

Organism: Nitratidesulfovibrio vulgaris str. Hildenborough

Library:

Name: DvH-MO-biofilm

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.5M spots, 442.8M bases, 226.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR5780890	1,469,815	442.8M	226.6Mb	2017-06-30

ID:: 4234053

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